WG 11 – Microscopy publication standards

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WG 11 – Objectives

WG11 will work together with scientific publishers to promote the adoption of best practices in the reporting of metadata (for both image acquisition and analysis) throughout scientific journals and books. Only by ensuring all relevant constituents researchers and imaging scientists submitting publications and designing research; editors, scientific publishers, and reviewers monitoring and preparing publications; and funders, researchers, and educators evaluating and disseminating publications) are working in concert can we raise the bar to ensure reproducibility in imaging experiments. WG11 will focus on the following activities: 1) inform scientific publishers of the standards and metadata put forward by the other QUAREP-LiMi Working Groups; 2) liaise with and encourage individual journals to modify their imaging guidelines to align with these recommendations; 3) work together with the scientific publishers to enforce high standards of imaging metadata reporting in all research works accepted for publication; 4) facilitate the involvement of technical reviewers with significant microscopy expertise during the review of papers that rely heavily on imaging techniques; 5) work together with publishers to promote and increase the appropriate acknowledgement and co-authorship of imaging scientists and core imaging facilities in publications; 6) encourage publishers to compel authors to make raw imaging data available if, and when, required for validation of published research and to make reasonable suggestions regarding duration of storage of raw imaging data relevant to published results; 7) propose minimum standards for figure quality, figure colour selection, scale bars, inserts, annotations and labelling, in order to render all microscopy figures easily interpretable by experts and non-experts alike.

WG 11 – Co-Chairs

WG 11 - Latest News

We welcome our first member from Qatar. Doha Abbirami of Sidra Medicine joined the Working Groups 3, 8, 9, 10, 11 and 12. Change the Quality of Light Microscopy Imaging as member of QUAREP-LiMi join us here.

We welcome our first member from the Ireland. Janosch Heller of the Dublin City University joined the Working Group 11. Change the Quality of Light Microscopy Imaging as member of QUAREP-LiMi join us here.

We welcome our first member from the Ecuador. William Narvaez joined the Working Groups 1, 3, 5, 9 and 11. Change the Quality of Light Microscopy Imaging as member of QUAREP-LiMi join us here.

 

Last meeting: 24th April 2025, 5:00 pm

A “Bare Minimum Standards for Microscopy Methods Reporting or Establishing Community-Driven Minimal Guidelines for Microscopy Methods Reporting” has been defined bei WG 11.

You can access the guidelines here.

29th meeting, 28th of March 2024

Meeting date

29/03/2024 @ 5:00 AM (CET/CEST)

Meeting summary

Vote on representative for ERB and OB. Continue discussing the decision tree for settings depending on applications

Meeting documentation

26th meeting, 7th of December 2023

Meeting date

07/12/2023 @ 5:00 PM (CET/CEST)

Meeting documentation

25th meeting, 26th of October 2023

Meeting date

26/10/2023 @ 5:00 PM (CET/CEST)

Meeting documentation

24th meeting, 28th of September 2023

Meeting date

28/09/2023 @ 5:00 PM (CET/CEST)

Meeting documentation

23rd meeting, 25th of May 2023

Meeting date

25/05/2023 @ 5:00 PM (CET/CEST)

Meeting documentation

22nd meeting, 27th of April 2023

Meeting date

27/04/2023 @ 5:00 PM (CET/CEST)

Meeting documentation

21st meeting, March 23rd 2023

Meeting date

24/03/2023 @ 12:00 AM (CET/CEST)

Meeting summary

1-We will review the Bare Minimal Requirements Checklist for “Methods” journals. You can all review it here: https://nextcloud.quarep.org/index.php/s/544SCiDkKHns9rj
2-We are also switching gears and will continue with the WG11 mission, which as you all know will include more comprehensive requirements. Below, please find the link to the document we will be working with today.

Meeting documentation

20th meeting, February 23rd 2023

Meeting date

23/02/2023 @ 10:51 AM (CET/CEST)

Meeting documentation

18th meeting, 9th of February 2023

Meeting summary

In order to get the finalized draft, we agreed on having the next meeting in two weeks. We will meet on Thursday Feb 9th at 11 am EST, 5pm CEST. We will start our discussion from the “Detectors” section. The only homework assigned to you is to read the current checklist document and start thinking about how you feel about the metadata items to be ready to have another great discussion. We will work on the checklist, but we will update the mind map too.

Meeting documentation

17th meeting, 26th January 2023

Meeting date

26/01/2023 @ 10:29 AM (CET/CEST)

Meeting summary

We are looking forward to continuing our work on publishing standards with you. As suggested, we are dedicating 1.5 h to our recurring meeting, which happens on the 4th Thursday of the month, at 11 am Boston time, 5 pm Berlin time. Thank you!  

Meeting documentation

Memberlist WG 11